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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs147883365 chr2:201996677 CT/C 0.000209 487 16.13 15.68 5.8 KM Plot
THCA rs147888284 chr19:43565806 A/G 0.000237 488 15.32 18.93 10.08 KM Plot
THCA rs147907652 chr2:48111840 GGTATTTTTGAA/G 4.29E-8 489 15.2 19.47 8.27 KM Plot
THCA rs147932754 chr19:43553294 TC/T 0.000228 489 15.32 18.3 10.08 KM Plot
THCA rs148004070 chr13:108852675 AAGT/A 6.02E-9 482 15.77 17.03 13.77 KM Plot
THCA rs148072785 chr1:26934501 TC/T 2.61E-8 485 15.68 15.97 23.17 KM Plot
THCA rs148075928 chr19:43561945 C/G 0.000237 489 15.3 18.93 10.08 KM Plot
THCA rs148093077 chr1:91718483 G/GA 9.35E-6 479 15.93 16.68 17.77 KM Plot
THCA rs148137246 chr9:72019887 C/T 2.81E-11 488 15.77 17.03 8.83 KM Plot
THCA rs148143142 chr2:48069303 C/T 1.02E-7 489 15.33 17.93 8.27 KM Plot
THCA rs148145758 chr6:119119744 T/C 0.000273 483 16.23 14.25 21.77 KM Plot
THCA rs148150713 chr19:43582444 A/G 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs148308025 chr19:43570563 G/T 0.000233 487 15.3 18.93 10.08 KM Plot
THCA rs1483213 chr2:48315267 A/G 2.49E-5 485 14.77 17.35 14.47 KM Plot
THCA rs148333421 chr10:104634010 C/CG 5.36E-9 481 15.63 17.73 32.1 KM Plot